Code

Tinker platform

The Tinker platform, a collection of tools and services built from the ground up for 3D genomics

Research article

Oncogenic reactivation of young L1s is a hallmark of colon cancer

Devin Neu et al. 2023

biorxiv

doi.org/10.1101/2023.05.17.541189

Research article

Convergence of case-specific epigenetic alterations identify a confluence of genetic vulnerabilities tied to opioid dependence​

Olivia Corradin et al. 2022

Molecular Psychiatry

doi.org/10.1038/s41380-022-01477-y

Collaborator talk

The Genetics of Opioid Addiction: What We Know, What We Are Learning

Olivia Corradin

Professor, MIT

youtube.com/watch?v=8MKF16y_QR4

Code

AQuA tools

A toolkit for 3D genomics. Developed in collaboration with the Gryder lab at CWRU

Research article

A regulatory variant at 3q21.1 confers an increased pleiotropic risk for hyperglycemia and altered bone mineral density​

Sinnott-Armstrong et al. 2021

Cell Metabolism

doi.org/10.1016/j.cmet.2021.01.001

Research article

Convergent mutations in tissue-specific regulatory regions reveal novel cancer drivers

Sinnott-Armstrong et al. 2020

biorxiv

doi.org/10.1101/2020.08.21.239954

Research article

Functional Enhancers Shape Extrachromosomal Oncogene Amplifications

Andrew R. Morton et al. 2019

Cell

doi.org/10.1016/j.cell.2019.10.039

Research article

Noncoding Somatic And Inherited Single-Nucleotide Variants Converge To Promote ESR1 Expression In Breast Cancer​

Swneke D Bailey et al. 2016

Nature Genetics

doi.org/10.1038/ng.3650

Research article

Convergence of Dispersed Regulatory Mutations Predicts Driver Genes in Prostate Cancer​

Richard Sallari et al. 2016

biorxiv

doi.org/10.1101/097451